Carnation DB

Dca2364.1

Annotation

5-exons
f-1
sp|B9S778_RICCO#Armadillo repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0774230#GO:0008270#1F0P0C
Repeat List (scaffold108)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2364.1	5	176	186	45.16	172	47	2e-44
Target_name	Start	End	Length	Cov(%)
sp\|B9S778_RICCO	61	238	719	24.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2364.1	2	182	186	43.54	181	44	4e-42
Target_name	Start	End	Length	Cov(%)
AT4G33940.1	65	250	262	70.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold108	Augustus	mRNA	217415	227543	.	-	.	ID=Dca2364.1;Parent=Dca2364
scaffold108	Augustus	exon	217415	217548	.	-	.	ID=Dca2364.1.exon1;Parent=Dca2364.1
scaffold108	Augustus	exon	218820	218871	.	-	.	ID=Dca2364.1.exon2;Parent=Dca2364.1
scaffold108	Augustus	exon	225569	225658	.	-	.	ID=Dca2364.1.exon3;Parent=Dca2364.1
scaffold108	Augustus	exon	226597	226787	.	-	.	ID=Dca2364.1.exon4;Parent=Dca2364.1
scaffold108	Augustus	exon	227450	227543	.	-	.	ID=Dca2364.1.exon5;Parent=Dca2364.1