Dca2365.1
Annotation
- 3-exons
- f-1
- sp|Q94H40_ORYSJ#Putative reverse transcriptase#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0077G22.5#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold108)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2365.1 |
8 |
561 |
581 |
33.73 |
554 |
31 |
9e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q94H40_ORYSJ |
290 |
928 |
1185 |
53.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2365.1 |
167 |
354 |
581 |
10.84 |
188 |
33 |
4e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
620 |
811 |
857 |
22.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold108 |
Augustus |
mRNA |
230096 |
233612 |
. |
- |
. |
ID=Dca2365.1;Parent=Dca2365 |
| scaffold108 |
Augustus |
exon |
230096 |
230621 |
. |
- |
. |
ID=Dca2365.1.exon1;Parent=Dca2365.1 |
| scaffold108 |
Augustus |
exon |
230705 |
231471 |
. |
- |
. |
ID=Dca2365.1.exon2;Parent=Dca2365.1 |
| scaffold108 |
Augustus |
exon |
233160 |
233612 |
. |
- |
. |
ID=Dca2365.1.exon3;Parent=Dca2365.1 |
