Dca23681.1
Annotation
- 3-exons
- f-1
- sp|Q8H7J5_ORYSJ#Putative retroelement#Oryza sativa subsp japonica (Rice)#Name=OJA1325D05.1#unknown#0F0P0C
- Repeat List (scaffold2365)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23681.1 |
9 |
408 |
499 |
27.05 |
400 |
32 |
3e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8H7J5_ORYSJ |
69 |
490 |
1146 |
36.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23681.1 |
13 |
215 |
499 |
14.82 |
203 |
37 |
6e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G48050.1 |
59 |
260 |
369 |
54.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2365 |
Augustus |
mRNA |
24126 |
26333 |
. |
- |
. |
ID=Dca23681.1;Parent=Dca23681 |
| scaffold2365 |
Augustus |
exon |
24126 |
24646 |
. |
- |
. |
ID=Dca23681.1.exon1;Parent=Dca23681.1 |
| scaffold2365 |
Augustus |
exon |
24742 |
25696 |
. |
- |
. |
ID=Dca23681.1.exon2;Parent=Dca23681.1 |
| scaffold2365 |
Augustus |
exon |
26310 |
26333 |
. |
- |
. |
ID=Dca23681.1.exon3;Parent=Dca23681.1 |
