Dca23685.1
Annotation
- 4-exons
- f-1
- sp|Q6L3S2_SOLDE#Putative retrotransposon protein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_41t00017#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2365)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23685.1 |
1 |
726 |
836 |
51.67 |
726 |
55 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3S2_SOLDE |
798 |
1595 |
1602 |
49.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23685.1 |
3 |
725 |
836 |
32.29 |
723 |
36 |
2e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
722 |
1475 |
1539 |
48.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2365 |
Augustus |
mRNA |
45086 |
49591 |
. |
- |
. |
ID=Dca23685.1;Parent=Dca23685 |
| scaffold2365 |
Augustus |
exon |
45086 |
45412 |
. |
- |
. |
ID=Dca23685.1.exon1;Parent=Dca23685.1 |
| scaffold2365 |
Augustus |
exon |
47211 |
47351 |
. |
- |
. |
ID=Dca23685.1.exon2;Parent=Dca23685.1 |
| scaffold2365 |
Augustus |
exon |
47463 |
48698 |
. |
- |
. |
ID=Dca23685.1.exon3;Parent=Dca23685.1 |
| scaffold2365 |
Augustus |
exon |
48785 |
49591 |
. |
- |
. |
ID=Dca23685.1.exon4;Parent=Dca23685.1 |
