Carnation DB

Dca23721.1

Annotation

9-exons
f-1
sp|B9GSE1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_755602#GO:0016021;GO:0005743;GO:0005488;GO:0055085#1F1P2C
sp|B9SAW7_RICCO#Mitochondrial carrier protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1179900#GO:0016021;GO:0005743;GO:0005488;GO:0055085#1F1P2C
Repeat List (scaffold237)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23721.1	3	210	316	19.93	208	30	2e-15
Target_name	Start	End	Length	Cov(%)
sp\|B9GSE1_POPTR	112	316	322	63.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23721.1	13	307	316	70.25	295	76	3e-122
Target_name	Start	End	Length	Cov(%)
Os05t0357200-01	30	323	337	87.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold237	Augus-PASA	mRNA	60909	65343	.	+	.	ID=Dca23721.1;Parent=Dca23721
scaffold237	Augus-PASA	exon	60909	60978	.	+	.	ID=Dca23721.1.exon1;Parent=Dca23721.1
scaffold237	Augus-PASA	exon	61080	61175	.	+	.	ID=Dca23721.1.exon2;Parent=Dca23721.1
scaffold237	Augus-PASA	exon	63155	63261	.	+	.	ID=Dca23721.1.exon3;Parent=Dca23721.1
scaffold237	Augus-PASA	exon	63550	63598	.	+	.	ID=Dca23721.1.exon4;Parent=Dca23721.1
scaffold237	Augus-PASA	exon	63734	63846	.	+	.	ID=Dca23721.1.exon5;Parent=Dca23721.1
scaffold237	Augus-PASA	exon	64051	64145	.	+	.	ID=Dca23721.1.exon6;Parent=Dca23721.1
scaffold237	Augus-PASA	exon	64511	64599	.	+	.	ID=Dca23721.1.exon7;Parent=Dca23721.1
scaffold237	Augus-PASA	exon	64682	64776	.	+	.	ID=Dca23721.1.exon8;Parent=Dca23721.1
scaffold237	Augus-PASA	exon	65107	65343	.	+	.	ID=Dca23721.1.exon9;Parent=Dca23721.1