Carnation DB

Dca2377.1

Annotation

5-exons
f-1
sp|D7TPB2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0104g00500#unknown#0F0P0C
Repeat List (scaffold1080)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2377.1	1	303	348	52.29	303	60	2e-92
Target_name	Start	End	Length	Cov(%)
sp\|D7TPB2_VITVI	1	295	341	86.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2377.1	1	303	348	42.81	303	49	5e-70
Target_name	Start	End	Length	Cov(%)
AT4G02800.1	1	299	333	89.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1080	Augus-PASA	mRNA	78731	80124	.	+	.	ID=Dca2377.1;Parent=Dca2377
scaffold1080	Augus-PASA	exon	78731	78775	.	+	.	ID=Dca2377.1.exon1;Parent=Dca2377.1
scaffold1080	Augus-PASA	exon	78863	79141	.	+	.	ID=Dca2377.1.exon2;Parent=Dca2377.1
scaffold1080	Augus-PASA	exon	79231	79467	.	+	.	ID=Dca2377.1.exon3;Parent=Dca2377.1
scaffold1080	Augus-PASA	exon	79549	79713	.	+	.	ID=Dca2377.1.exon4;Parent=Dca2377.1
scaffold1080	Augus-PASA	exon	79804	80124	.	+	.	ID=Dca2377.1.exon5;Parent=Dca2377.1