Carnation DB

Dca23816.1

Annotation

5-exons
f-1
sp|B9RRN2_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1648550#GO:0005488#1F0P0C
AT4G14180.1 | Symbols: AtPRD1, PRD1 | putative recombination initiation defect 1 | chr4:8178330-8183515 FORWARD LENGTH=1268
Repeat List (scaffold2378)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23816.1	2	528	548	39.41	527	41	3e-111
Target_name	Start	End	Length	Cov(%)
sp\|B9RRN2_RICCO	740	1271	1304	40.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23816.1	2	524	548	36.49	523	38	1e-98
Target_name	Start	End	Length	Cov(%)
AT4G14180.1	686	1213	1268	41.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2378	Augustus	mRNA	14250	17370	.	-	.	ID=Dca23816.1;Parent=Dca23816
scaffold2378	Augustus	exon	14250	14278	.	-	.	ID=Dca23816.1.exon1;Parent=Dca23816.1
scaffold2378	Augustus	exon	14542	14710	.	-	.	ID=Dca23816.1.exon2;Parent=Dca23816.1
scaffold2378	Augustus	exon	15717	16386	.	-	.	ID=Dca23816.1.exon3;Parent=Dca23816.1
scaffold2378	Augustus	exon	16473	16753	.	-	.	ID=Dca23816.1.exon4;Parent=Dca23816.1
scaffold2378	Augustus	exon	16873	17370	.	-	.	ID=Dca23816.1.exon5;Parent=Dca23816.1