Dca23830.1
Annotation
- 3-exons
- f-1
- sp|D7LJA5_ARALL#ATNAP12#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_482684#GO:0005524;GO:0016887#2F0P0C
- Repeat List (scaffold238)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23830.1 |
27 |
82 |
135 |
28.14 |
56 |
68 |
5e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LJA5_ARALL |
871 |
926 |
1063 |
5.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23830.1 |
27 |
82 |
135 |
28.14 |
56 |
68 |
4e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G37010.1 |
890 |
945 |
1082 |
5.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold238 |
Augustus |
mRNA |
2926 |
4596 |
. |
+ |
. |
ID=Dca23830.1;Parent=Dca23830 |
| scaffold238 |
Augustus |
exon |
2926 |
3005 |
. |
+ |
. |
ID=Dca23830.1.exon1;Parent=Dca23830.1 |
| scaffold238 |
Augustus |
exon |
3562 |
3778 |
. |
+ |
. |
ID=Dca23830.1.exon2;Parent=Dca23830.1 |
| scaffold238 |
Augustus |
exon |
4486 |
4596 |
. |
+ |
. |
ID=Dca23830.1.exon3;Parent=Dca23830.1 |
