Dca23873.1
Annotation
- 2-exons
- f-1
- sp|Q9LVQ1_ARATH#Non-LTR retroelement reverse transcriptase-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold2383)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23873.1 |
1 |
348 |
349 |
43.83 |
348 |
40 |
2e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LVQ1_ARATH |
359 |
740 |
1072 |
35.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23873.1 |
2 |
348 |
349 |
32.95 |
347 |
31 |
2e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0643433-00 |
14 |
395 |
644 |
59.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2383 |
Augustus |
mRNA |
11639 |
12795 |
. |
+ |
. |
ID=Dca23873.1;Parent=Dca23873 |
| scaffold2383 |
Augustus |
exon |
11639 |
12153 |
. |
+ |
. |
ID=Dca23873.1.exon1;Parent=Dca23873.1 |
| scaffold2383 |
Augustus |
exon |
12261 |
12795 |
. |
+ |
. |
ID=Dca23873.1.exon2;Parent=Dca23873.1 |
