Dca23893.1
Annotation
- 2-exons
- f-1
- sp|C5NNT7_ORYSI#Putative retrotransposon protein#Oryza sativa subsp indica (Rice)#Name=OsPupK37-1#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Repeat List (scaffold23850)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23893.1 |
1 |
386 |
386 |
62.43 |
386 |
61 |
1e-138
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C5NNT7_ORYSI |
1011 |
1408 |
1666 |
23.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23893.1 |
5 |
386 |
386 |
37.04 |
382 |
36 |
4e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
843 |
1236 |
1539 |
25.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold23850 |
Augustus |
mRNA |
1 |
1285 |
. |
- |
. |
ID=Dca23893.1;Parent=Dca23893 |
| scaffold23850 |
Augustus |
exon |
1 |
693 |
. |
- |
. |
ID=Dca23893.1.exon1;Parent=Dca23893.1 |
| scaffold23850 |
Augustus |
exon |
820 |
1285 |
. |
- |
. |
ID=Dca23893.1.exon2;Parent=Dca23893.1 |
