Carnation DB

Dca23926.1

Annotation

10-exons
f-1
sp|D7SQB0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0052g00850#GO:0003676#1F0P0C
sp|Q4LAW1_CAPCH#Putative replication factor A#Capsicum chinense (Scotch bonnet) (Bonnet pepper)#Name=rfa#GO:0003676#1F0P0C
Repeat List (scaffold239)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23926.1	1	274	274	61.67	274	62	6e-98
Target_name	Start	End	Length	Cov(%)
sp\|D7SQB0_VITVI	1	277	277	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23926.1	3	269	274	47.81	267	47	2e-67
Target_name	Start	End	Length	Cov(%)
AT2G24490.1	4	275	279	97.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold239	Augus-PASA	mRNA	13771	18652	.	-	.	ID=Dca23926.1;Parent=Dca23926
scaffold239	Augus-PASA	exon	13771	13855	.	-	.	ID=Dca23926.1.exon1;Parent=Dca23926.1
scaffold239	Augus-PASA	exon	13977	14045	.	-	.	ID=Dca23926.1.exon2;Parent=Dca23926.1
scaffold239	Augus-PASA	exon	14668	14741	.	-	.	ID=Dca23926.1.exon3;Parent=Dca23926.1
scaffold239	Augus-PASA	exon	14833	14919	.	-	.	ID=Dca23926.1.exon4;Parent=Dca23926.1
scaffold239	Augus-PASA	exon	15003	15081	.	-	.	ID=Dca23926.1.exon5;Parent=Dca23926.1
scaffold239	Augus-PASA	exon	17538	17615	.	-	.	ID=Dca23926.1.exon6;Parent=Dca23926.1
scaffold239	Augus-PASA	exon	17774	17815	.	-	.	ID=Dca23926.1.exon7;Parent=Dca23926.1
scaffold239	Augus-PASA	exon	17924	18021	.	-	.	ID=Dca23926.1.exon8;Parent=Dca23926.1
scaffold239	Augus-PASA	exon	18294	18404	.	-	.	ID=Dca23926.1.exon9;Parent=Dca23926.1
scaffold239	Augus-PASA	exon	18551	18652	.	-	.	ID=Dca23926.1.exon10;Parent=Dca23926.1