Dca23947.1
Annotation
- 4-exons
- f-1
- sp|B9IL48_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_910433#GO:0016021;GO:0005524;GO:0004674#2F0P1C
- AT3G47570.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr3:17527611-17530748 FORWARD LENGTH=1010
- Repeat List (scaffold239)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23947.1 |
22 |
820 |
826 |
49.03 |
799 |
46 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IL48_POPTR |
75 |
955 |
1026 |
85.86 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23947.1 |
242 |
498 |
826 |
11.5 |
257 |
37 |
4e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G47570.1 |
60 |
317 |
1010 |
25.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold239 |
Augustus |
mRNA |
226263 |
230562 |
. |
- |
. |
ID=Dca23947.1;Parent=Dca23947 |
| scaffold239 |
Augustus |
exon |
226263 |
226465 |
. |
- |
. |
ID=Dca23947.1.exon1;Parent=Dca23947.1 |
| scaffold239 |
Augustus |
exon |
227256 |
228998 |
. |
- |
. |
ID=Dca23947.1.exon2;Parent=Dca23947.1 |
| scaffold239 |
Augustus |
exon |
229195 |
229667 |
. |
- |
. |
ID=Dca23947.1.exon3;Parent=Dca23947.1 |
| scaffold239 |
Augustus |
exon |
230501 |
230562 |
. |
- |
. |
ID=Dca23947.1.exon4;Parent=Dca23947.1 |
