Carnation DB

Dca23984.1

Annotation

8-exons
f-1
sp|B9GLZ7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_639820#unknown#0F0P0C
Os05t0386000-02 Similar to Root determined nodulation 1.
Repeat List (scaffold2393)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23984.1	1	318	318	80.5	318	81	1e-156
Target_name	Start	End	Length	Cov(%)
sp\|B9GLZ7_POPTR	45	362	362	87.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23984.1	2	316	318	78.61	315	80	2e-153
Target_name	Start	End	Length	Cov(%)
AT5G13500.1	42	356	358	87.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2393	Augus-PASA	mRNA	40149	44422	.	+	.	ID=Dca23984.1;Parent=Dca23984
scaffold2393	Augus-PASA	exon	40149	40418	.	+	.	ID=Dca23984.1.exon1;Parent=Dca23984.1
scaffold2393	Augus-PASA	exon	41429	41496	.	+	.	ID=Dca23984.1.exon2;Parent=Dca23984.1
scaffold2393	Augus-PASA	exon	41594	41795	.	+	.	ID=Dca23984.1.exon3;Parent=Dca23984.1
scaffold2393	Augus-PASA	exon	41936	42033	.	+	.	ID=Dca23984.1.exon4;Parent=Dca23984.1
scaffold2393	Augus-PASA	exon	42125	42194	.	+	.	ID=Dca23984.1.exon5;Parent=Dca23984.1
scaffold2393	Augus-PASA	exon	42288	42359	.	+	.	ID=Dca23984.1.exon6;Parent=Dca23984.1
scaffold2393	Augus-PASA	exon	42663	42776	.	+	.	ID=Dca23984.1.exon7;Parent=Dca23984.1
scaffold2393	Augus-PASA	exon	44360	44422	.	+	.	ID=Dca23984.1.exon8;Parent=Dca23984.1