Dca23986.1
Annotation
- 2-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold23933)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23986.1 |
8 |
204 |
241 |
51.03 |
197 |
55 |
6e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
728 |
952 |
1788 |
12.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23986.1 |
72 |
201 |
241 |
18.25 |
130 |
34 |
7e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
236 |
346 |
707 |
15.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold23933 |
Augustus |
mRNA |
756 |
1560 |
. |
+ |
. |
ID=Dca23986.1;Parent=Dca23986 |
| scaffold23933 |
Augustus |
exon |
756 |
930 |
. |
+ |
. |
ID=Dca23986.1.exon1;Parent=Dca23986.1 |
| scaffold23933 |
Augustus |
exon |
1010 |
1560 |
. |
+ |
. |
ID=Dca23986.1.exon2;Parent=Dca23986.1 |
