Carnation DB

Dca2402.1

Annotation

7-exons
f-1
sp|B9T038_RICCO#Calcium-binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1144940#GO:0005488#1F0P0C
Repeat List (scaffold10814)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2402.1	2	113	233	24.46	112	50	2e-16
Target_name	Start	End	Length	Cov(%)
sp\|B9T038_RICCO	100	199	445	22.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2402.1	24	113	233	21.88	90	55	2e-17
Target_name	Start	End	Length	Cov(%)
Os07t0585100-01	6	96	337	27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10814	Augustus	mRNA	2918	6590	.	-	.	ID=Dca2402.1;Parent=Dca2402
scaffold10814	Augustus	exon	2918	3003	.	-	.	ID=Dca2402.1.exon1;Parent=Dca2402.1
scaffold10814	Augustus	exon	3221	3323	.	-	.	ID=Dca2402.1.exon2;Parent=Dca2402.1
scaffold10814	Augustus	exon	3421	3465	.	-	.	ID=Dca2402.1.exon3;Parent=Dca2402.1
scaffold10814	Augustus	exon	3895	3963	.	-	.	ID=Dca2402.1.exon4;Parent=Dca2402.1
scaffold10814	Augustus	exon	4055	4114	.	-	.	ID=Dca2402.1.exon5;Parent=Dca2402.1
scaffold10814	Augustus	exon	5168	5329	.	-	.	ID=Dca2402.1.exon6;Parent=Dca2402.1
scaffold10814	Augustus	exon	6414	6590	.	-	.	ID=Dca2402.1.exon7;Parent=Dca2402.1