Carnation DB

Dca24041.1

Annotation

23-exons
f-1
sp|B9ILH5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_825829#GO:0016020;GO:0005524;GO:0016887#2F0P1C
Os01t0609200-00 Similar to Pleiotropic drug resistance protein 3.
Repeat List (scaffold24)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24041.1	1	1416	1416	73.37	1416	72	0
Target_name	Start	End	Length	Cov(%)
sp\|B9ILH5_POPTR	1	1420	1420	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24041.1	1	1416	1416	71.11	1416	70	0
Target_name	Start	End	Length	Cov(%)
AT2G26910.1	1	1420	1420	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold24	Augus-PASA	mRNA	144900	153672	.	-	.	ID=Dca24041.1;Parent=Dca24041
scaffold24	Augus-PASA	exon	144900	145172	.	-	.	ID=Dca24041.1.exon1;Parent=Dca24041.1
scaffold24	Augus-PASA	exon	145262	145516	.	-	.	ID=Dca24041.1.exon2;Parent=Dca24041.1
scaffold24	Augus-PASA	exon	145799	145970	.	-	.	ID=Dca24041.1.exon3;Parent=Dca24041.1
scaffold24	Augus-PASA	exon	146070	146431	.	-	.	ID=Dca24041.1.exon4;Parent=Dca24041.1
scaffold24	Augus-PASA	exon	146512	146595	.	-	.	ID=Dca24041.1.exon5;Parent=Dca24041.1
scaffold24	Augustus	exon	146740	147030	.	-	.	ID=Dca24041.1.exon6;Parent=Dca24041.1
scaffold24	Augustus	exon	147114	147446	.	-	.	ID=Dca24041.1.exon7;Parent=Dca24041.1
scaffold24	Augustus	exon	147535	147626	.	-	.	ID=Dca24041.1.exon8;Parent=Dca24041.1
scaffold24	Augustus	exon	147712	147875	.	-	.	ID=Dca24041.1.exon9;Parent=Dca24041.1
scaffold24	Augustus	exon	148018	148085	.	-	.	ID=Dca24041.1.exon10;Parent=Dca24041.1
scaffold24	Augustus	exon	148170	148273	.	-	.	ID=Dca24041.1.exon11;Parent=Dca24041.1
scaffold24	Augustus	exon	148446	148606	.	-	.	ID=Dca24041.1.exon12;Parent=Dca24041.1
scaffold24	Augustus	exon	148690	149075	.	-	.	ID=Dca24041.1.exon13;Parent=Dca24041.1
scaffold24	Augustus	exon	149157	149438	.	-	.	ID=Dca24041.1.exon14;Parent=Dca24041.1
scaffold24	Augustus	exon	149520	149821	.	-	.	ID=Dca24041.1.exon15;Parent=Dca24041.1
scaffold24	Augustus	exon	149909	149999	.	-	.	ID=Dca24041.1.exon16;Parent=Dca24041.1
scaffold24	Augustus	exon	150221	150274	.	-	.	ID=Dca24041.1.exon17;Parent=Dca24041.1
scaffold24	Augustus	exon	150354	150430	.	-	.	ID=Dca24041.1.exon18;Parent=Dca24041.1
scaffold24	Augustus	exon	150513	150672	.	-	.	ID=Dca24041.1.exon19;Parent=Dca24041.1
scaffold24	Augustus	exon	151202	151286	.	-	.	ID=Dca24041.1.exon20;Parent=Dca24041.1
scaffold24	Augustus	exon	151385	151473	.	-	.	ID=Dca24041.1.exon21;Parent=Dca24041.1
scaffold24	Augustus	exon	151560	151629	.	-	.	ID=Dca24041.1.exon22;Parent=Dca24041.1
scaffold24	Augustus	exon	153377	153672	.	-	.	ID=Dca24041.1.exon23;Parent=Dca24041.1