Carnation DB

Dca24062.1

Annotation

5-exons
f-1
sp|B9N7C0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_930890#unknown#0F0P0C
AT2G20130.1 | Symbols: LCV1 | like COV 1 | chr2:8690614-8692234 REVERSE LENGTH=256
Repeat List (scaffold24)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24062.1	58	217	217	68.66	160	94	1e-81
Target_name	Start	End	Length	Cov(%)
sp\|B9N7C0_POPTR	94	252	254	62.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24062.1	54	216	217	64.05	163	86	5e-79
Target_name	Start	End	Length	Cov(%)
AT2G20120.1	105	267	268	60.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold24	Augustus	mRNA	308027	311766	.	-	.	ID=Dca24062.1;Parent=Dca24062
scaffold24	Augustus	exon	308027	308118	.	-	.	ID=Dca24062.1.exon1;Parent=Dca24062.1
scaffold24	Augustus	exon	308510	308636	.	-	.	ID=Dca24062.1.exon2;Parent=Dca24062.1
scaffold24	Augustus	exon	309501	309598	.	-	.	ID=Dca24062.1.exon3;Parent=Dca24062.1
scaffold24	Augustus	exon	309684	309851	.	-	.	ID=Dca24062.1.exon4;Parent=Dca24062.1
scaffold24	Augustus	exon	311598	311766	.	-	.	ID=Dca24062.1.exon5;Parent=Dca24062.1