Carnation DB

Dca24066.1

Annotation

10-exons
f-1
sp|B9I4U6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_891844#unknown#0F0P0C
AT3G58130.1 | Symbols: | N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein | chr3:21527946-21529654 FORWARD LENGTH=257
Repeat List (scaffold24)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24066.1	6	224	225	63.55	219	66	1e-86
Target_name	Start	End	Length	Cov(%)
sp\|B9I4U6_POPTR	42	260	265	82.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24066.1	3	224	225	60	222	61	7e-78
Target_name	Start	End	Length	Cov(%)
AT3G58130.1	37	256	257	85.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold24	Augus-PASA	mRNA	322409	325239	.	-	.	ID=Dca24066.1;Parent=Dca24066
scaffold24	Augus-PASA	exon	322409	322478	.	-	.	ID=Dca24066.1.exon1;Parent=Dca24066.1
scaffold24	Augus-PASA	exon	322571	322731	.	-	.	ID=Dca24066.1.exon2;Parent=Dca24066.1
scaffold24	Augus-PASA	exon	322823	322871	.	-	.	ID=Dca24066.1.exon3;Parent=Dca24066.1
scaffold24	Augus-PASA	exon	323004	323071	.	-	.	ID=Dca24066.1.exon4;Parent=Dca24066.1
scaffold24	Augus-PASA	exon	323262	323342	.	-	.	ID=Dca24066.1.exon5;Parent=Dca24066.1
scaffold24	Augus-PASA	exon	323436	323480	.	-	.	ID=Dca24066.1.exon6;Parent=Dca24066.1
scaffold24	Augus-PASA	exon	323856	323920	.	-	.	ID=Dca24066.1.exon7;Parent=Dca24066.1
scaffold24	Augus-PASA	exon	324047	324117	.	-	.	ID=Dca24066.1.exon8;Parent=Dca24066.1
scaffold24	Augus-PASA	exon	324440	324500	.	-	.	ID=Dca24066.1.exon9;Parent=Dca24066.1
scaffold24	Augustus	exon	325233	325239	.	-	.	ID=Dca24066.1.exon10;Parent=Dca24066.1