Carnation DB

Dca24331.1

Annotation

13-exons
f-1
sp|E0CPJ0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g13660#unknown#0F0P0C
AT4G29860.1 | Symbols: EMB2757, TAN | Transducin/WD40 repeat-like superfamily protein | chr4:14603296-14605704 REVERSE LENGTH=386
Repeat List (scaffold242)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24331.1	12	393	397	58.94	382	62	7e-141
Target_name	Start	End	Length	Cov(%)
sp\|E0CPJ0_VITVI	5	382	382	98.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24331.1	12	396	397	57.17	385	59	6e-134
Target_name	Start	End	Length	Cov(%)
AT4G29860.1	5	385	386	98.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold242	Augus-PASA	mRNA	78813	82664	.	+	.	ID=Dca24331.1;Parent=Dca24331
scaffold242	Augus-PASA	exon	78813	78937	.	+	.	ID=Dca24331.1.exon1;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	79019	79081	.	+	.	ID=Dca24331.1.exon2;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	79185	79256	.	+	.	ID=Dca24331.1.exon3;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	79349	79405	.	+	.	ID=Dca24331.1.exon4;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	80196	80401	.	+	.	ID=Dca24331.1.exon5;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	80611	80669	.	+	.	ID=Dca24331.1.exon6;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	80760	80853	.	+	.	ID=Dca24331.1.exon7;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	80968	81034	.	+	.	ID=Dca24331.1.exon8;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	81397	81479	.	+	.	ID=Dca24331.1.exon9;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	81560	81651	.	+	.	ID=Dca24331.1.exon10;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	81754	81860	.	+	.	ID=Dca24331.1.exon11;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	82213	82276	.	+	.	ID=Dca24331.1.exon12;Parent=Dca24331.1
scaffold242	Augus-PASA	exon	82560	82664	.	+	.	ID=Dca24331.1.exon13;Parent=Dca24331.1