Carnation DB

Dca24343.1

Annotation

8-exons
f-1
sp|F6H0L1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g02700#GO:0051537;GO:0010277;GO:0005506;GO:0016705#4F0P0C
AT1G44446.1 | Symbols: CH1, ATCAO, CAO | Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain | chr1:16848664-16851152 REVERSE LENGTH=536
Repeat List (scaffold242)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24343.1	35	530	532	74.81	496	79	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H0L1_VITVI	10	514	518	97.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24343.1	1	530	532	75.75	530	75	0
Target_name	Start	End	Length	Cov(%)
AT1G44446.1	1	534	536	99.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold242	Augustus	mRNA	176617	178901	.	-	.	ID=Dca24343.1;Parent=Dca24343
scaffold242	Augustus	exon	176617	176781	.	-	.	ID=Dca24343.1.exon1;Parent=Dca24343.1
scaffold242	Augustus	exon	176904	177198	.	-	.	ID=Dca24343.1.exon2;Parent=Dca24343.1
scaffold242	Augustus	exon	177297	177409	.	-	.	ID=Dca24343.1.exon3;Parent=Dca24343.1
scaffold242	Augustus	exon	177505	177689	.	-	.	ID=Dca24343.1.exon4;Parent=Dca24343.1
scaffold242	Augustus	exon	177792	177939	.	-	.	ID=Dca24343.1.exon5;Parent=Dca24343.1
scaffold242	Augustus	exon	178030	178296	.	-	.	ID=Dca24343.1.exon6;Parent=Dca24343.1
scaffold242	Augustus	exon	178385	178489	.	-	.	ID=Dca24343.1.exon7;Parent=Dca24343.1
scaffold242	Augustus	exon	178581	178901	.	-	.	ID=Dca24343.1.exon8;Parent=Dca24343.1