Carnation DB

Dca24362.1

Annotation

11-exons
f-1
sp|B9HDI7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_416612#GO:0005634;GO:0003677;GO:0008270;GO:0006355;GO:0006351#2F2P1C
AT4G32010.1 | Symbols: HSL1, HSI2-L1, VAL2 | HSI2-like 1 | chr4:15481231-15484897 FORWARD LENGTH=780
Repeat List (scaffold2422)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24362.1	4	537	566	45.75	534	41	4e-120
Target_name	Start	End	Length	Cov(%)
sp\|B9HDI7_POPTR	1	630	714	88.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24362.1	4	556	566	42.93	553	39	2e-111
Target_name	Start	End	Length	Cov(%)
AT4G32010.1	5	623	780	79.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2422	Augustus	mRNA	8059	14624	.	+	.	ID=Dca24362.1;Parent=Dca24362
scaffold2422	Augustus	exon	8059	8174	.	+	.	ID=Dca24362.1.exon1;Parent=Dca24362.1
scaffold2422	Augustus	exon	9312	9393	.	+	.	ID=Dca24362.1.exon2;Parent=Dca24362.1
scaffold2422	Augustus	exon	9489	9928	.	+	.	ID=Dca24362.1.exon3;Parent=Dca24362.1
scaffold2422	Augustus	exon	10060	10156	.	+	.	ID=Dca24362.1.exon4;Parent=Dca24362.1
scaffold2422	Augustus	exon	10242	10416	.	+	.	ID=Dca24362.1.exon5;Parent=Dca24362.1
scaffold2422	Augustus	exon	10551	10624	.	+	.	ID=Dca24362.1.exon6;Parent=Dca24362.1
scaffold2422	Augustus	exon	10772	11098	.	+	.	ID=Dca24362.1.exon7;Parent=Dca24362.1
scaffold2422	Augustus	exon	12830	12879	.	+	.	ID=Dca24362.1.exon8;Parent=Dca24362.1
scaffold2422	Augustus	exon	13703	13816	.	+	.	ID=Dca24362.1.exon9;Parent=Dca24362.1
scaffold2422	Augustus	exon	13934	14001	.	+	.	ID=Dca24362.1.exon10;Parent=Dca24362.1
scaffold2422	Augustus	exon	14467	14624	.	+	.	ID=Dca24362.1.exon11;Parent=Dca24362.1