Carnation DB

Dca24413.1

Annotation

6-exons
f-1
sp|A5C1G0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_030954#GO:0016021;GO:0005524;GO:0004674#2F0P1C
AT3G47570.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr3:17527611-17530748 FORWARD LENGTH=1010
Repeat List (scaffold2428)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24413.1	4	749	2709	9.08	746	33	2e-94
Target_name	Start	End	Length	Cov(%)
sp\|A5C1G0_VITVI	934	1551	1904	32.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24413.1	4	129	2709	1.58	126	35	1e-14
Target_name	Start	End	Length	Cov(%)
AT3G47570.1	891	1005	1010	11.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2428	Augustus	mRNA	14194	32690	.	+	.	ID=Dca24413.1;Parent=Dca24413
scaffold2428	Augustus	exon	14194	14605	.	+	.	ID=Dca24413.1.exon1;Parent=Dca24413.1
scaffold2428	Augustus	exon	16912	20889	.	+	.	ID=Dca24413.1.exon2;Parent=Dca24413.1
scaffold2428	Augustus	exon	24052	26631	.	+	.	ID=Dca24413.1.exon3;Parent=Dca24413.1
scaffold2428	Augustus	exon	27012	27277	.	+	.	ID=Dca24413.1.exon4;Parent=Dca24413.1
scaffold2428	Augustus	exon	31530	31814	.	+	.	ID=Dca24413.1.exon5;Parent=Dca24413.1
scaffold2428	Augustus	exon	32082	32690	.	+	.	ID=Dca24413.1.exon6;Parent=Dca24413.1