Carnation DB

Dca24435.1

Annotation

14-exons
f-1
sp|D7T2W9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0064g01360#GO:0005524;GO:0031072;GO:0046872;GO:0051082;GO:0006457;GO:0009408#4F2P0C
sp|B9RHH1_RICCO#Chaperone protein DNAj, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1526580#GO:0005524;GO:0031072;GO:0046872;GO:0051082;GO:0006457;GO:0009408#4F2P0C
Repeat List (scaffold243)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24435.1	4	398	399	66.16	395	67	2e-150
Target_name	Start	End	Length	Cov(%)
sp\|D7T2W9_VITVI	63	450	451	86.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24435.1	4	399	399	60.65	396	61	3e-138
Target_name	Start	End	Length	Cov(%)
AT5G48030.1	62	456	456	86.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold243	Augustus	mRNA	58300	63286	.	+	.	ID=Dca24435.1;Parent=Dca24435
scaffold243	Augustus	exon	58300	58381	.	+	.	ID=Dca24435.1.exon1;Parent=Dca24435.1
scaffold243	Augustus	exon	58582	58664	.	+	.	ID=Dca24435.1.exon2;Parent=Dca24435.1
scaffold243	Augustus	exon	58890	58973	.	+	.	ID=Dca24435.1.exon3;Parent=Dca24435.1
scaffold243	Augustus	exon	59087	59125	.	+	.	ID=Dca24435.1.exon4;Parent=Dca24435.1
scaffold243	Augustus	exon	59622	59753	.	+	.	ID=Dca24435.1.exon5;Parent=Dca24435.1
scaffold243	Augus-PASA	exon	60532	60664	.	+	.	ID=Dca24435.1.exon6;Parent=Dca24435.1
scaffold243	Augus-PASA	exon	60784	60848	.	+	.	ID=Dca24435.1.exon7;Parent=Dca24435.1
scaffold243	Augus-PASA	exon	60947	61021	.	+	.	ID=Dca24435.1.exon8;Parent=Dca24435.1
scaffold243	Augus-PASA	exon	61606	61678	.	+	.	ID=Dca24435.1.exon9;Parent=Dca24435.1
scaffold243	Augus-PASA	exon	62054	62217	.	+	.	ID=Dca24435.1.exon10;Parent=Dca24435.1
scaffold243	Augus-PASA	exon	62621	62677	.	+	.	ID=Dca24435.1.exon11;Parent=Dca24435.1
scaffold243	Augus-PASA	exon	62767	62815	.	+	.	ID=Dca24435.1.exon12;Parent=Dca24435.1
scaffold243	Augus-PASA	exon	62977	63043	.	+	.	ID=Dca24435.1.exon13;Parent=Dca24435.1
scaffold243	Augus-PASA	exon	63190	63286	.	+	.	ID=Dca24435.1.exon14;Parent=Dca24435.1