Carnation DB

Dca24532.1

Annotation

9-exons
f-2
sp|D7SHD3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g09890#GO:0005488#1F0P0C
AT5G63200.1 | Symbols: | tetratricopeptide repeat (TPR)-containing protein | chr5:25349043-25352899 FORWARD LENGTH=649
Repeat List (scaffold244)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24532.1	3	585	594	69.52	583	71	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SHD3_VITVI	67	649	658	88.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24532.1	25	592	594	60.77	568	64	0
Target_name	Start	End	Length	Cov(%)
AT5G63200.1	79	645	649	87.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold244	Augustus	mRNA	1410	5029	.	+	.	ID=Dca24532.1;Parent=Dca24532
scaffold244	Augustus	exon	1410	1629	.	+	.	ID=Dca24532.1.exon1;Parent=Dca24532.1
scaffold244	Augustus	exon	2194	2286	.	+	.	ID=Dca24532.1.exon2;Parent=Dca24532.1
scaffold244	Augustus	exon	2367	2468	.	+	.	ID=Dca24532.1.exon3;Parent=Dca24532.1
scaffold244	Augustus	exon	2635	2802	.	+	.	ID=Dca24532.1.exon4;Parent=Dca24532.1
scaffold244	Augustus	exon	2897	2985	.	+	.	ID=Dca24532.1.exon5;Parent=Dca24532.1
scaffold244	Augustus	exon	3337	3458	.	+	.	ID=Dca24532.1.exon6;Parent=Dca24532.1
scaffold244	Augustus	exon	3703	3887	.	+	.	ID=Dca24532.1.exon7;Parent=Dca24532.1
scaffold244	Augustus	exon	4031	4315	.	+	.	ID=Dca24532.1.exon8;Parent=Dca24532.1
scaffold244	Augustus	exon	4508	5029	.	+	.	ID=Dca24532.1.exon9;Parent=Dca24532.1