Carnation DB

Dca24535.1

Annotation

5-exons
f-1
sp|D7SHB6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g10080#GO:0005634;GO:0003677;GO:0006355;GO:0006351#1F2P1C
Os01t0905400-01 Transcriptional factor B3 family protein.
Repeat List (scaffold244)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24535.1	392	503	505	7.92	112	34	2e-13
Target_name	Start	End	Length	Cov(%)
sp\|D7SHB6_VITVI	420	539	541	22.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24535.1	7	130	505	10.09	124	42	2e-21
Target_name	Start	End	Length	Cov(%)
Os01t0905400-01	72	194	674	18.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold244	Augustus	mRNA	39572	42160	.	+	.	ID=Dca24535.1;Parent=Dca24535
scaffold244	Augustus	exon	39572	39661	.	+	.	ID=Dca24535.1.exon1;Parent=Dca24535.1
scaffold244	Augustus	exon	39751	40525	.	+	.	ID=Dca24535.1.exon2;Parent=Dca24535.1
scaffold244	Augustus	exon	40853	41002	.	+	.	ID=Dca24535.1.exon3;Parent=Dca24535.1
scaffold244	Augustus	exon	41440	41717	.	+	.	ID=Dca24535.1.exon4;Parent=Dca24535.1
scaffold244	Augustus	exon	41936	42160	.	+	.	ID=Dca24535.1.exon5;Parent=Dca24535.1