Carnation DB

Dca24546.1

Annotation

8-exons
f-1
sp|D7SHA5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g10250#unknown#0F0P0C
AT4G24820.1 | Symbols: | 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain | chr4:12790471-12792599 REVERSE LENGTH=387
Repeat List (scaffold244)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24546.1	5	387	387	86.04	383	87	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SHA5_VITVI	4	386	386	99.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24546.1	1	387	387	81.13	387	82	0
Target_name	Start	End	Length	Cov(%)
AT4G24820.1	1	387	387	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold244	Augus-PASA	mRNA	118494	122262	.	+	.	ID=Dca24546.1;Parent=Dca24546
scaffold244	Augus-PASA	exon	118494	118632	.	+	.	ID=Dca24546.1.exon1;Parent=Dca24546.1
scaffold244	Augus-PASA	exon	119402	119516	.	+	.	ID=Dca24546.1.exon2;Parent=Dca24546.1
scaffold244	Augus-PASA	exon	120597	120687	.	+	.	ID=Dca24546.1.exon3;Parent=Dca24546.1
scaffold244	Augus-PASA	exon	120807	120952	.	+	.	ID=Dca24546.1.exon4;Parent=Dca24546.1
scaffold244	Augus-PASA	exon	121070	121289	.	+	.	ID=Dca24546.1.exon5;Parent=Dca24546.1
scaffold244	Augus-PASA	exon	121388	121496	.	+	.	ID=Dca24546.1.exon6;Parent=Dca24546.1
scaffold244	Augus-PASA	exon	121626	121794	.	+	.	ID=Dca24546.1.exon7;Parent=Dca24546.1
scaffold244	Augus-PASA	exon	122088	122262	.	+	.	ID=Dca24546.1.exon8;Parent=Dca24546.1