Carnation DB

Dca24710.1

Annotation

7-exons
f-1
sp|A9PIK2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_547984#unknown#0F0P0C
AT4G13710.1 | Symbols: | Pectin lyase-like superfamily protein | chr4:7962550-7966012 FORWARD LENGTH=470
Repeat List (scaffold2458)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24710.1	10	442	442	80.09	433	82	0
Target_name	Start	End	Length	Cov(%)
sp\|A9PIK2_POPTR	14	450	450	97.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24710.1	32	442	442	72.85	411	78	0
Target_name	Start	End	Length	Cov(%)
AT4G13710.1	55	470	470	88.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2458	Augustus	mRNA	16106	20874	.	+	.	ID=Dca24710.1;Parent=Dca24710
scaffold2458	Augustus	exon	16106	16200	.	+	.	ID=Dca24710.1.exon1;Parent=Dca24710.1
scaffold2458	Augustus	exon	16309	16359	.	+	.	ID=Dca24710.1.exon2;Parent=Dca24710.1
scaffold2458	Augustus	exon	18068	18142	.	+	.	ID=Dca24710.1.exon3;Parent=Dca24710.1
scaffold2458	Augustus	exon	19415	20057	.	+	.	ID=Dca24710.1.exon4;Parent=Dca24710.1
scaffold2458	Augustus	exon	20167	20270	.	+	.	ID=Dca24710.1.exon5;Parent=Dca24710.1
scaffold2458	Augustus	exon	20392	20530	.	+	.	ID=Dca24710.1.exon6;Parent=Dca24710.1
scaffold2458	Augustus	exon	20653	20874	.	+	.	ID=Dca24710.1.exon7;Parent=Dca24710.1