Carnation DB

Dca24976.1

Annotation

5-exons
f-1
sp|B9IQF4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_780590#unknown#0F0P0C
AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:13040092-13041907 FORWARD LENGTH=259
Repeat List (scaffold2484)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24976.1	13	249	250	56	237	56	2e-60
Target_name	Start	End	Length	Cov(%)
sp\|B9IQF4_POPTR	26	245	246	89.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24976.1	7	247	250	55.6	241	54	9e-59
Target_name	Start	End	Length	Cov(%)
AT1G35460.1	20	254	259	90.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2484	Augus-PASA	mRNA	10837	14039	.	-	.	ID=Dca24976.1;Parent=Dca24976
scaffold2484	Augus-PASA	exon	10837	10884	.	-	.	ID=Dca24976.1.exon1;Parent=Dca24976.1
scaffold2484	Augus-PASA	exon	11093	11161	.	-	.	ID=Dca24976.1.exon2;Parent=Dca24976.1
scaffold2484	Augus-PASA	exon	13078	13143	.	-	.	ID=Dca24976.1.exon3;Parent=Dca24976.1
scaffold2484	Augus-PASA	exon	13235	13363	.	-	.	ID=Dca24976.1.exon4;Parent=Dca24976.1
scaffold2484	Augus-PASA	exon	13599	14039	.	-	.	ID=Dca24976.1.exon5;Parent=Dca24976.1