Carnation DB

Dca25115.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold2498)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25115.1	109	685	794	33.24	577	41	5e-110
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	99	728	1717	36.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25115.1	462	553	794	4.03	92	35	4e-08
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	189	192	47.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2498	Augustus	mRNA	6782	11322	.	+	.	ID=Dca25115.1;Parent=Dca25115
scaffold2498	Augustus	exon	6782	7066	.	+	.	ID=Dca25115.1.exon1;Parent=Dca25115.1
scaffold2498	Augustus	exon	8903	9487	.	+	.	ID=Dca25115.1.exon2;Parent=Dca25115.1
scaffold2498	Augustus	exon	9575	9963	.	+	.	ID=Dca25115.1.exon3;Parent=Dca25115.1
scaffold2498	Augustus	exon	10045	10718	.	+	.	ID=Dca25115.1.exon4;Parent=Dca25115.1
scaffold2498	Augustus	exon	10871	11322	.	+	.	ID=Dca25115.1.exon5;Parent=Dca25115.1