Carnation DB

Dca25152.1

Annotation

2-exons
f-1
sp|F4NCI4_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold25)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25152.1	1	1283	1289	40.1	1283	40	0
Target_name	Start	End	Length	Cov(%)
sp\|F4NCI4_BETVU	45	1366	1369	96.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25152.1	79	864	1289	18.92	786	30	5e-114
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	50	856	857	94.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold25	Augustus	mRNA	187224	191171	.	+	.	ID=Dca25152.1;Parent=Dca25152
scaffold25	Augustus	exon	187224	189510	.	+	.	ID=Dca25152.1.exon1;Parent=Dca25152.1
scaffold25	Augustus	exon	189589	191171	.	+	.	ID=Dca25152.1.exon2;Parent=Dca25152.1
scaffold25	Augustus	mRNA	188775	191171	.	+	.	ID=Dca25152.2;Parent=Dca25152
scaffold25	Augustus	exon	188775	189510	.	+	.	ID=Dca25152.2.exon1;Parent=Dca25152.2
scaffold25	Augustus	exon	189589	191171	.	+	.	ID=Dca25152.2.exon2;Parent=Dca25152.2