Carnation DB

Dca2522.1

Annotation

7-exons
f-1
sp|D7LWN7_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_487116#GO:0005667;GO:0003677;GO:0003700;GO:0006351#2F1P1C
AT5G03415.1 | Symbols: DPB, ATDPB | Transcription factor DP | chr5:842842-845200 FORWARD LENGTH=385
Repeat List (scaffold10877)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2522.1	1	302	340	52.35	302	51	2e-77
Target_name	Start	End	Length	Cov(%)
sp\|D7LWN7_ARALL	1	309	389	79.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2522.1	19	302	340	49.11	284	52	1e-75
Target_name	Start	End	Length	Cov(%)
AT5G03415.1	25	305	385	72.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10877	Augustus	mRNA	4082	7133	.	+	.	ID=Dca2522.1;Parent=Dca2522
scaffold10877	Augustus	exon	4082	4298	.	+	.	ID=Dca2522.1.exon1;Parent=Dca2522.1
scaffold10877	Augustus	exon	4798	4841	.	+	.	ID=Dca2522.1.exon2;Parent=Dca2522.1
scaffold10877	Augustus	exon	5514	5564	.	+	.	ID=Dca2522.1.exon3;Parent=Dca2522.1
scaffold10877	Augustus	exon	5652	5795	.	+	.	ID=Dca2522.1.exon4;Parent=Dca2522.1
scaffold10877	Augustus	exon	5875	6165	.	+	.	ID=Dca2522.1.exon5;Parent=Dca2522.1
scaffold10877	Augustus	exon	6770	6840	.	+	.	ID=Dca2522.1.exon6;Parent=Dca2522.1
scaffold10877	Augustus	exon	6929	7133	.	+	.	ID=Dca2522.1.exon7;Parent=Dca2522.1