Carnation DB

Dca25275.1

Annotation

5-exons
f-1
sp|A5C1Z6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_042072#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold2507)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25275.1	362	441	1302	2.61	80	43	4e-12
Target_name	Start	End	Length	Cov(%)
sp\|A5C1Z6_VITVI	987	1066	1268	6.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25275.1	670	1050	1302	9.9	381	34	2e-58
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	229	587	707	50.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2507	Augustus	mRNA	33898	39213	.	-	.	ID=Dca25275.1;Parent=Dca25275
scaffold2507	Augustus	exon	33898	34585	.	-	.	ID=Dca25275.1.exon1;Parent=Dca25275.1
scaffold2507	Augustus	exon	35395	35463	.	-	.	ID=Dca25275.1.exon2;Parent=Dca25275.1
scaffold2507	Augustus	exon	35695	37522	.	-	.	ID=Dca25275.1.exon3;Parent=Dca25275.1
scaffold2507	Augustus	exon	37723	38831	.	-	.	ID=Dca25275.1.exon4;Parent=Dca25275.1
scaffold2507	Augustus	exon	38999	39213	.	-	.	ID=Dca25275.1.exon5;Parent=Dca25275.1