Carnation DB

Dca25393.1

Annotation

5-exons
f-1
sp|A9P8U3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_734872#GO:0005509#1F0P0C
AT3G10300.3 | Symbols: | Calcium-binding EF-hand family protein | chr3:3186436-3188071 FORWARD LENGTH=335
Repeat List (scaffold252)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25393.1	9	257	257	51.36	249	51	2e-66
Target_name	Start	End	Length	Cov(%)
sp\|A9P8U3_POPTR	46	307	307	85.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25393.1	77	257	257	43.57	181	61	8e-63
Target_name	Start	End	Length	Cov(%)
AT3G10300.3	152	335	335	54.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold252	Augus-PASA	mRNA	176046	177190	.	-	.	ID=Dca25393.1;Parent=Dca25393
scaffold252	Augus-PASA	exon	176046	176144	.	-	.	ID=Dca25393.1.exon1;Parent=Dca25393.1
scaffold252	Augus-PASA	exon	176247	176265	.	-	.	ID=Dca25393.1.exon2;Parent=Dca25393.1
scaffold252	Augus-PASA	exon	176371	176543	.	-	.	ID=Dca25393.1.exon3;Parent=Dca25393.1
scaffold252	Augus-PASA	exon	176631	176677	.	-	.	ID=Dca25393.1.exon4;Parent=Dca25393.1
scaffold252	Augus-PASA	exon	176755	177190	.	-	.	ID=Dca25393.1.exon5;Parent=Dca25393.1