Dca25469.1
Annotation
- 2-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold2529)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25469.1 |
14 |
399 |
526 |
42.01 |
386 |
58 |
3e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
1101 |
1485 |
1499 |
25.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25469.1 |
8 |
432 |
526 |
32.12 |
425 |
40 |
4e-93
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1076 |
1493 |
1539 |
27.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2529 |
Augustus |
mRNA |
27590 |
30129 |
. |
- |
. |
ID=Dca25469.1;Parent=Dca25469 |
| scaffold2529 |
Augustus |
exon |
27590 |
27950 |
. |
- |
. |
ID=Dca25469.1.exon1;Parent=Dca25469.1 |
| scaffold2529 |
Augustus |
exon |
28910 |
30129 |
. |
- |
. |
ID=Dca25469.1.exon2;Parent=Dca25469.1 |
