Carnation DB

Dca26013.1

Annotation

12-exons
f-1
sp|D7UB76_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0024g00850#GO:0016740;GO:0008299#1F1P0C
sp|Q9FET8_QUERO#Geranyl diphosphat synthase#Quercus robur (English oak)#Name=gppS#GO:0016740;GO:0008299#1F1P0C
Repeat List (scaffold2589)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26013.1	20	353	392	55.86	334	66	2e-122
Target_name	Start	End	Length	Cov(%)
sp\|D7UB76_VITVI	67	396	422	78.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26013.1	16	353	392	50	338	58	1e-111
Target_name	Start	End	Length	Cov(%)
Os06t0678200-01	71	404	431	77.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2589	Augustus	mRNA	6841	15173	.	-	.	ID=Dca26013.1;Parent=Dca26013
scaffold2589	Augustus	exon	6841	6950	.	-	.	ID=Dca26013.1.exon1;Parent=Dca26013.1
scaffold2589	Augustus	exon	7640	7748	.	-	.	ID=Dca26013.1.exon2;Parent=Dca26013.1
scaffold2589	Augustus	exon	8123	8221	.	-	.	ID=Dca26013.1.exon3;Parent=Dca26013.1
scaffold2589	Augustus	exon	8690	8779	.	-	.	ID=Dca26013.1.exon4;Parent=Dca26013.1
scaffold2589	Augustus	exon	8936	9068	.	-	.	ID=Dca26013.1.exon5;Parent=Dca26013.1
scaffold2589	Augustus	exon	9569	9654	.	-	.	ID=Dca26013.1.exon6;Parent=Dca26013.1
scaffold2589	Augustus	exon	9761	9832	.	-	.	ID=Dca26013.1.exon7;Parent=Dca26013.1
scaffold2589	Augustus	exon	10359	10445	.	-	.	ID=Dca26013.1.exon8;Parent=Dca26013.1
scaffold2589	Augustus	exon	12551	12694	.	-	.	ID=Dca26013.1.exon9;Parent=Dca26013.1
scaffold2589	Augustus	exon	13272	13343	.	-	.	ID=Dca26013.1.exon10;Parent=Dca26013.1
scaffold2589	Augustus	exon	13454	13534	.	-	.	ID=Dca26013.1.exon11;Parent=Dca26013.1
scaffold2589	Augustus	exon	15078	15173	.	-	.	ID=Dca26013.1.exon12;Parent=Dca26013.1