Dca26048.1
Annotation
- 3-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2590)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26048.1 |
1 |
326 |
358 |
61.73 |
326 |
59 |
2e-122
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
928 |
1299 |
1788 |
20.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26048.1 |
1 |
276 |
358 |
26.53 |
276 |
35 |
1e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
96 |
367 |
591 |
46.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2590 |
Augustus |
mRNA |
4370 |
7203 |
. |
- |
. |
ID=Dca26048.1;Parent=Dca26048 |
| scaffold2590 |
Augustus |
exon |
4370 |
4484 |
. |
- |
. |
ID=Dca26048.1.exon1;Parent=Dca26048.1 |
| scaffold2590 |
Augustus |
exon |
6129 |
6259 |
. |
- |
. |
ID=Dca26048.1.exon2;Parent=Dca26048.1 |
| scaffold2590 |
Augustus |
exon |
6373 |
7203 |
. |
- |
. |
ID=Dca26048.1.exon3;Parent=Dca26048.1 |
