Carnation DB

Dca2609.1

Annotation

5-exons
f-1
sp|B9S614_RICCO#XPA-binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1063020#GO:0005634;GO:0005488;GO:0006397#1F1P1C
Repeat List (scaffold1090)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2609.1	3	915	917	78.84	913	79	0
Target_name	Start	End	Length	Cov(%)
sp\|B9S614_RICCO	2	915	916	99.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2609.1	3	917	917	75.13	915	75	0
Target_name	Start	End	Length	Cov(%)
AT5G28740.1	2	917	917	99.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1090	Augus-PASA	mRNA	28234	34238	.	+	.	ID=Dca2609.1;Parent=Dca2609
scaffold1090	Augus-PASA	exon	28234	29749	.	+	.	ID=Dca2609.1.exon1;Parent=Dca2609.1
scaffold1090	Augus-PASA	exon	31400	31584	.	+	.	ID=Dca2609.1.exon2;Parent=Dca2609.1
scaffold1090	Augus-PASA	exon	31671	31841	.	+	.	ID=Dca2609.1.exon3;Parent=Dca2609.1
scaffold1090	Augus-PASA	exon	32291	32743	.	+	.	ID=Dca2609.1.exon4;Parent=Dca2609.1
scaffold1090	Augus-PASA	exon	33810	34238	.	+	.	ID=Dca2609.1.exon5;Parent=Dca2609.1