Carnation DB

Dca2611.1

Annotation

13-exons
f-1
sp|D7TJG8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g00630#unknown#0F0P0C
AT4G18470.1 | Symbols: SNI1 | negative regulator of systemic acquired resistance (SNI1) | chr4:10192984-10195511 FORWARD LENGTH=432
Repeat List (scaffold1090)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2611.1	6	414	416	46.63	409	47	9e-103
Target_name	Start	End	Length	Cov(%)
sp\|D7TJG8_VITVI	59	473	474	87.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2611.1	6	412	416	39.18	407	40	9e-72
Target_name	Start	End	Length	Cov(%)
AT4G18470.1	67	428	432	83.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1090	Augustus	mRNA	58107	62973	.	+	.	ID=Dca2611.1;Parent=Dca2611
scaffold1090	Augustus	exon	58107	58217	.	+	.	ID=Dca2611.1.exon1;Parent=Dca2611.1
scaffold1090	Augustus	exon	59130	59210	.	+	.	ID=Dca2611.1.exon2;Parent=Dca2611.1
scaffold1090	Augus-PASA	exon	59294	59383	.	+	.	ID=Dca2611.1.exon3;Parent=Dca2611.1
scaffold1090	Augus-PASA	exon	59932	59997	.	+	.	ID=Dca2611.1.exon4;Parent=Dca2611.1
scaffold1090	Augus-PASA	exon	60166	60253	.	+	.	ID=Dca2611.1.exon5;Parent=Dca2611.1
scaffold1090	Augus-PASA	exon	60333	60382	.	+	.	ID=Dca2611.1.exon6;Parent=Dca2611.1
scaffold1090	Augus-PASA	exon	60504	60707	.	+	.	ID=Dca2611.1.exon7;Parent=Dca2611.1
scaffold1090	Augus-PASA	exon	60793	60863	.	+	.	ID=Dca2611.1.exon8;Parent=Dca2611.1
scaffold1090	Augus-PASA	exon	60963	61032	.	+	.	ID=Dca2611.1.exon9;Parent=Dca2611.1
scaffold1090	Augus-PASA	exon	61240	61305	.	+	.	ID=Dca2611.1.exon10;Parent=Dca2611.1
scaffold1090	Augus-PASA	exon	62091	62240	.	+	.	ID=Dca2611.1.exon11;Parent=Dca2611.1
scaffold1090	Augus-PASA	exon	62478	62608	.	+	.	ID=Dca2611.1.exon12;Parent=Dca2611.1
scaffold1090	Augus-PASA	exon	62901	62973	.	+	.	ID=Dca2611.1.exon13;Parent=Dca2611.1