Dca26124.1
Annotation
- 3-exons
- f-1
- sp|B9MX56_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_592924#GO:0015629;GO:0005634;GO:0005198;GO:0004842;GO:0008270;GO:0007155;GO:0007275;GO:0006511#3F3P2C
- AT5G37930.1 | Symbols: | Protein with RING/U-box and TRAF-like domains | chr5:15102239-15103651 REVERSE LENGTH=349
- Repeat List (scaffold26)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26124.1 |
98 |
339 |
375 |
29.6 |
242 |
45 |
3e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MX56_POPTR |
109 |
356 |
372 |
66.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26124.1 |
105 |
341 |
375 |
22.93 |
237 |
35 |
4e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G37930.1 |
103 |
344 |
349 |
69.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold26 |
Augus-PASA |
mRNA |
20245 |
23104 |
. |
+ |
. |
ID=Dca26124.1;Parent=Dca26124 |
| scaffold26 |
Augus-PASA |
exon |
20245 |
20628 |
. |
+ |
. |
ID=Dca26124.1.exon1;Parent=Dca26124.1 |
| scaffold26 |
Augustus |
exon |
21703 |
22367 |
. |
+ |
. |
ID=Dca26124.1.exon2;Parent=Dca26124.1 |
| scaffold26 |
Augustus |
exon |
23026 |
23104 |
. |
+ |
. |
ID=Dca26124.1.exon3;Parent=Dca26124.1 |
