Carnation DB

Dca26138.1

Annotation

7-exons
f-1
sp|B9RSN8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1728180#GO:0003723#1F0P0C
AT5G16180.1 | Symbols: CRS1, ATCRS1 | ortholog of maize chloroplast splicing factor CRS1 | chr5:5279884-5282898 FORWARD LENGTH=720
Repeat List (scaffold26)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26138.1	43	717	756	46.82	675	49	9e-172
Target_name	Start	End	Length	Cov(%)
sp\|B9RSN8_RICCO	20	736	742	96.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26138.1	80	717	756	42.72	638	47	2e-156
Target_name	Start	End	Length	Cov(%)
AT5G16180.1	81	716	720	88.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold26	Augustus	mRNA	113504	117760	.	-	.	ID=Dca26138.1;Parent=Dca26138
scaffold26	Augustus	exon	113504	113635	.	-	.	ID=Dca26138.1.exon1;Parent=Dca26138.1
scaffold26	Augustus	exon	113909	113968	.	-	.	ID=Dca26138.1.exon2;Parent=Dca26138.1
scaffold26	Augustus	exon	114060	114349	.	-	.	ID=Dca26138.1.exon3;Parent=Dca26138.1
scaffold26	Augustus	exon	114739	114895	.	-	.	ID=Dca26138.1.exon4;Parent=Dca26138.1
scaffold26	Augustus	exon	114984	115334	.	-	.	ID=Dca26138.1.exon5;Parent=Dca26138.1
scaffold26	Augustus	exon	115986	116429	.	-	.	ID=Dca26138.1.exon6;Parent=Dca26138.1
scaffold26	Augustus	exon	116924	117760	.	-	.	ID=Dca26138.1.exon7;Parent=Dca26138.1