Carnation DB

Dca26173.1

Annotation

6-exons
f-1
sp|A5AFS9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_022290#unknown#0F0P0C
Os02t0728700-01 Ribosomal RNA-processing protein 7 domain containing protein.
Repeat List (scaffold26)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26173.1	88	236	236	45.33	149	72	1e-61
Target_name	Start	End	Length	Cov(%)
sp\|A5AFS9_VITVI	155	303	303	49.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26173.1	89	236	236	41.1	148	66	2e-52
Target_name	Start	End	Length	Cov(%)
AT5G38720.1	158	306	306	48.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold26	Augus-PASA	mRNA	385663	388275	.	-	.	ID=Dca26173.1;Parent=Dca26173
scaffold26	Augus-PASA	exon	385663	385748	.	-	.	ID=Dca26173.1.exon1;Parent=Dca26173.1
scaffold26	Augus-PASA	exon	386158	386368	.	-	.	ID=Dca26173.1.exon2;Parent=Dca26173.1
scaffold26	Augus-PASA	exon	386677	386774	.	-	.	ID=Dca26173.1.exon3;Parent=Dca26173.1
scaffold26	Augus-PASA	exon	387150	387296	.	-	.	ID=Dca26173.1.exon4;Parent=Dca26173.1
scaffold26	Augus-PASA	exon	387629	387727	.	-	.	ID=Dca26173.1.exon5;Parent=Dca26173.1
scaffold26	Augustus	exon	388206	388275	.	-	.	ID=Dca26173.1.exon6;Parent=Dca26173.1