Carnation DB

Dca26178.1

Annotation

6-exons
f-1
sp|B9N1Y3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_266088#GO:0030170;GO:0004834#2F0P0C
AT5G38530.1 | Symbols: TSBtype2 | tryptophan synthase beta type 2 | chr5:15424097-15426294 FORWARD LENGTH=506
Repeat List (scaffold26)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26178.1	40	500	503	75.74	461	83	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N1Y3_POPTR	1	461	461	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26178.1	12	498	503	73.35	487	76	0
Target_name	Start	End	Length	Cov(%)
AT5G38530.1	15	503	506	96.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold26	Augustus	mRNA	411913	414863	.	+	.	ID=Dca26178.1;Parent=Dca26178
scaffold26	Augustus	exon	411913	411973	.	+	.	ID=Dca26178.1.exon1;Parent=Dca26178.1
scaffold26	Augustus	exon	413006	413342	.	+	.	ID=Dca26178.1.exon2;Parent=Dca26178.1
scaffold26	Augustus	exon	413452	413668	.	+	.	ID=Dca26178.1.exon3;Parent=Dca26178.1
scaffold26	Augustus	exon	413756	414293	.	+	.	ID=Dca26178.1.exon4;Parent=Dca26178.1
scaffold26	Augustus	exon	414402	414500	.	+	.	ID=Dca26178.1.exon5;Parent=Dca26178.1
scaffold26	Augustus	exon	414604	414863	.	+	.	ID=Dca26178.1.exon6;Parent=Dca26178.1