Carnation DB

Dca2618.1

Annotation

5-exons
f-3
sp|A5B1N0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_032155#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold10903)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2618.1	40	396	655	31.45	357	51	5e-113
Target_name	Start	End	Length	Cov(%)
sp\|A5B1N0_VITVI	818	1224	2301	17.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2618.1	106	272	655	8.24	167	33	3e-15
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	237	384	707	20.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10903	Augustus	mRNA	576	4103	.	+	.	ID=Dca2618.1;Parent=Dca2618
scaffold10903	Augustus	exon	576	1362	.	+	.	ID=Dca2618.1.exon1;Parent=Dca2618.1
scaffold10903	Augustus	exon	1579	1945	.	+	.	ID=Dca2618.1.exon2;Parent=Dca2618.1
scaffold10903	Augustus	exon	2174	2635	.	+	.	ID=Dca2618.1.exon3;Parent=Dca2618.1
scaffold10903	Augustus	exon	2707	3006	.	+	.	ID=Dca2618.1.exon4;Parent=Dca2618.1
scaffold10903	Augustus	exon	4050	4103	.	+	.	ID=Dca2618.1.exon5;Parent=Dca2618.1