Dca26259.1
Annotation
- 2-exons
- f-13
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold26058)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26259.1 |
47 |
409 |
421 |
62.23 |
363 |
73 |
4e-160
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
754 |
1116 |
1788 |
20.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26259.1 |
107 |
409 |
421 |
23.75 |
303 |
33 |
1e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
229 |
513 |
707 |
40.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold26058 |
Augustus |
mRNA |
31 |
1428 |
. |
- |
. |
ID=Dca26259.1;Parent=Dca26259 |
| scaffold26058 |
Augustus |
exon |
31 |
1152 |
. |
- |
. |
ID=Dca26259.1.exon1;Parent=Dca26259.1 |
| scaffold26058 |
Augustus |
exon |
1285 |
1428 |
. |
- |
. |
ID=Dca26259.1.exon2;Parent=Dca26259.1 |
