Dca2637.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold10915)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2637.1 |
1 |
420 |
511 |
55.38 |
420 |
61 |
7e-164
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
483 |
950 |
1553 |
30.13 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2637.1 |
1 |
415 |
511 |
33.07 |
415 |
36 |
4e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
137 |
602 |
707 |
65.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10915 |
Augustus |
mRNA |
2773 |
5436 |
. |
+ |
. |
ID=Dca2637.1;Parent=Dca2637 |
| scaffold10915 |
Augustus |
exon |
2773 |
3741 |
. |
+ |
. |
ID=Dca2637.1.exon1;Parent=Dca2637.1 |
| scaffold10915 |
Augustus |
exon |
3883 |
4171 |
. |
+ |
. |
ID=Dca2637.1.exon2;Parent=Dca2637.1 |
| scaffold10915 |
Augustus |
exon |
4717 |
4762 |
. |
+ |
. |
ID=Dca2637.1.exon3;Parent=Dca2637.1 |
| scaffold10915 |
Augustus |
exon |
5205 |
5436 |
. |
+ |
. |
ID=Dca2637.1.exon4;Parent=Dca2637.1 |
