Carnation DB

Dca26404.1

Annotation

6-exons
f-1
sp|B9HPN5_POPTR#Glutamate receptor#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_803968#GO:0016021;GO:0030288;GO:0005234;GO:0004970#2F0P2C
Repeat List (scaffold262)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26404.1	13	881	911	59.93	869	63	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HPN5_POPTR	5	878	900	97.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26404.1	20	893	911	57.4	874	60	0
Target_name	Start	End	Length	Cov(%)
AT4G35290.2	18	900	912	96.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold262	Augus-PASA	mRNA	106841	110446	.	-	.	ID=Dca26404.1;Parent=Dca26404
scaffold262	Augus-PASA	exon	106841	107269	.	-	.	ID=Dca26404.1.exon1;Parent=Dca26404.1
scaffold262	Augus-PASA	exon	107415	107809	.	-	.	ID=Dca26404.1.exon2;Parent=Dca26404.1
scaffold262	Augus-PASA	exon	108171	108202	.	-	.	ID=Dca26404.1.exon3;Parent=Dca26404.1
scaffold262	Augustus	exon	108289	108566	.	-	.	ID=Dca26404.1.exon4;Parent=Dca26404.1
scaffold262	Augustus	exon	108697	110033	.	-	.	ID=Dca26404.1.exon5;Parent=Dca26404.1
scaffold262	Augustus	exon	110182	110446	.	-	.	ID=Dca26404.1.exon6;Parent=Dca26404.1