Carnation DB

Dca26409.1

Annotation

9-exons
f-1
sp|B9HPX1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_199710#unknown#0F0P0C
sp|B9SYR1_RICCO#Nucleolar complex protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0035800#unknown#0F0P0C
Repeat List (scaffold262)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26409.1	65	349	353	60.33	285	75	7e-121
Target_name	Start	End	Length	Cov(%)
sp\|B9HPX1_POPTR	290	574	575	49.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26409.1	65	345	353	54.1	281	68	4e-109
Target_name	Start	End	Length	Cov(%)
AT2G17250.1	293	568	577	47.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold262	Augustus	mRNA	223934	229275	.	-	.	ID=Dca26409.1;Parent=Dca26409
scaffold262	Augustus	exon	223934	224053	.	-	.	ID=Dca26409.1.exon1;Parent=Dca26409.1
scaffold262	Augustus	exon	224658	224763	.	-	.	ID=Dca26409.1.exon2;Parent=Dca26409.1
scaffold262	Augustus	exon	224869	224926	.	-	.	ID=Dca26409.1.exon3;Parent=Dca26409.1
scaffold262	Augustus	exon	225241	225394	.	-	.	ID=Dca26409.1.exon4;Parent=Dca26409.1
scaffold262	Augustus	exon	225910	226083	.	-	.	ID=Dca26409.1.exon5;Parent=Dca26409.1
scaffold262	Augustus	exon	226169	226343	.	-	.	ID=Dca26409.1.exon6;Parent=Dca26409.1
scaffold262	Augustus	exon	226419	226477	.	-	.	ID=Dca26409.1.exon7;Parent=Dca26409.1
scaffold262	Augustus	exon	227393	227487	.	-	.	ID=Dca26409.1.exon8;Parent=Dca26409.1
scaffold262	Augustus	exon	229155	229275	.	-	.	ID=Dca26409.1.exon9;Parent=Dca26409.1