Dca26473.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2627)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26473.1 |
2 |
200 |
200 |
75.5 |
199 |
62 |
7e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
511 |
754 |
1501 |
16.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26473.1 |
45 |
197 |
200 |
40.5 |
153 |
53 |
6e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
288 |
440 |
707 |
21.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2627 |
Augustus |
mRNA |
34641 |
35372 |
. |
- |
. |
ID=Dca26473.1;Parent=Dca26473 |
| scaffold2627 |
Augustus |
exon |
34641 |
35107 |
. |
- |
. |
ID=Dca26473.1.exon1;Parent=Dca26473.1 |
| scaffold2627 |
Augustus |
exon |
35237 |
35372 |
. |
- |
. |
ID=Dca26473.1.exon2;Parent=Dca26473.1 |
