Dca26541.1
Annotation
- 4-exons
- f-1
- sp|B9N224_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_580788#unknown#0F0P0C
- AT1G13340.1 | Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr1:4569622-4571043 REVERSE LENGTH=409
- Repeat List (scaffold2634)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26541.1 |
9 |
184 |
193 |
43 |
176 |
47 |
4e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N224_POPTR |
14 |
192 |
290 |
61.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26541.1 |
1 |
182 |
193 |
43.52 |
182 |
45 |
9e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G13340.1 |
1 |
187 |
409 |
45.72 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2634 |
Augustus |
mRNA |
41872 |
42770 |
. |
+ |
. |
ID=Dca26541.1;Parent=Dca26541 |
| scaffold2634 |
Augustus |
exon |
41872 |
42042 |
. |
+ |
. |
ID=Dca26541.1.exon1;Parent=Dca26541.1 |
| scaffold2634 |
Augustus |
exon |
42134 |
42237 |
. |
+ |
. |
ID=Dca26541.1.exon2;Parent=Dca26541.1 |
| scaffold2634 |
Augustus |
exon |
42370 |
42541 |
. |
+ |
. |
ID=Dca26541.1.exon3;Parent=Dca26541.1 |
| scaffold2634 |
Augustus |
exon |
42636 |
42770 |
. |
+ |
. |
ID=Dca26541.1.exon4;Parent=Dca26541.1 |
