Dca26548.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2636)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26548.1 |
1 |
366 |
478 |
39.95 |
366 |
48 |
1e-92
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
24 |
419 |
1307 |
30.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26548.1 |
216 |
317 |
478 |
6.9 |
102 |
33 |
9e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
349 |
450 |
1428 |
7.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2636 |
Augustus |
mRNA |
31621 |
33126 |
. |
+ |
. |
ID=Dca26548.1;Parent=Dca26548 |
| scaffold2636 |
Augustus |
exon |
31621 |
32182 |
. |
+ |
. |
ID=Dca26548.1.exon1;Parent=Dca26548.1 |
| scaffold2636 |
Augustus |
exon |
32252 |
33126 |
. |
+ |
. |
ID=Dca26548.1.exon2;Parent=Dca26548.1 |
